Patentable/Patents/US-8139831
US-8139831

System and method for unsupervised detection and gleason grading of prostate cancer whole mounts using NIR fluorscence

PublishedMarch 20, 2012
Assigneenot available in USPTO data we have
Inventorsnot available in USPTO data we have
Technical Abstract

A method for unsupervised classification of histological images of prostatic tissue includes providing histological image data obtained from a slide simultaneously co-stained with NIR fluorescent and Hematoxylin-and-Eosin (H&E) stains, segmenting prostate gland units in the image data, forming feature vectors by computing discriminating attributes of the segmented gland units, and using the feature vectors to train a multi-class classifier, where the classifier classifies prostatic tissue into benign, prostatic intraepithelial neoplasia (PIN), and Gleason scale adenocarcinoma grades 1 to 5 categories.

Patent Claims
12 claims

Legal claims defining the scope of protection, as filed with the USPTO.

1

1. A method for unsupervised classification of histological images of prostatic tissue, comprising the steps of: providing histological image data obtained from a slide simultaneously co-stained with NIR fluorescent and Hematoxylin-and-Eosin (H&E) stains; segmenting prostate gland units in the image data; forming feature vectors by computing discriminating attributes of the segmented gland units; and using said feature vectors to train a multi-class classifier within a Bayesian framework, wherein said classifier is arranged to classify prostatic tissue into benign, prostatic intraepithelial neoplasia (PIN), and Gleason scale adenocarcinoma grades 1 to 5 categories and to use Bayesian posterior probabilities to determine a strength of a diagnosis, wherein a borderline prognosis between two categories is provided to a second phase classifier using a classification model whose parameters are tuned to the two categories of the borderline prognosis.

2

2. The method of claim 1 , wherein said classifier is trained to detect a most prominent and a second most prominent pattern in said image data, and to compute a Gleason score as a sum of Gleason grades of said patterns.

3

3. The method of claim 1 , wherein said classifier is trained using a multi-class support vector machine using a probabilistic interpretation of the classifier output.

4

4. The method of claim 1 , wherein said classifier is trained using a multi-class boosting algorithm using a probabilistic interpretation of the classifier output.

5

5. The method of claim 1 , wherein said slide is co-stained with an AMACR biomarker.

6

6. The method of claim 1 , wherein said discriminating attributes include boundary and region descriptors, structural descriptors, and texture descriptors.

7

7. A program storage device readable by a computer, tangibly embodying a program of instructions executable by the computer to perform the method steps for unsupervised classification of histological images of prostatic tissue, said method comprising the steps of: providing histological image data obtained from a slide simultaneously co-stained with NIR fluorescent and Hematoxylin-and-Eosin (H&E) stains; segmenting prostate gland units in the image data; forming feature vectors by computing discriminating attributes of the segmented gland units; and using said feature vectors to train a multi-class classifier within a Bayesian framework, wherein said classifier is arranged to classify prostatic tissue into benign, prostatic intraepithelial neoplasia (PIN), and Gleason scale adenocarcinoma grades 1 to 5 categories and to use Bayesian posterior probabilities to determine a strength of a diagnosis, wherein a borderline prognosis between two categories is provided to a second phase classifier using a classification model whose parameters are tuned to the two categories of the borderline prognosis.

8

8. The computer readable program storage device of claim 7 , wherein said classifier is trained to detect a most prominent and a second most prominent pattern in said image data, and to compute a Gleason score as a sum of Gleason grades of said patterns.

9

9. The computer readable program storage device of claim 7 , wherein said classifier is trained using a multi-class support vector machine using a probabilistic interpretation of the classifier output.

10

10. The computer readable program storage device of claim 7 , wherein said classifier is trained using a multi-class boosting algorithm using a probabilistic interpretation of the classifier output.

11

11. The computer readable program storage device of claim 7 , wherein said slide is co-stained with an AMACR biomarker.

12

12. The computer readable program storage device of claim 7 , wherein said discriminating attributes include boundary and region descriptors, structural descriptors, and texture descriptors.

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Patent Metadata

Filing Date

December 2, 2008

Publication Date

March 20, 2012

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Cite as: Patentable. “System and method for unsupervised detection and gleason grading of prostate cancer whole mounts using NIR fluorscence” (US-8139831). https://patentable.app/patents/US-8139831

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